sample treatment treatment2 rep uninf_rep1 uninfected uninfected 1 uninf_rep2 uninfected uninfected 2 uninf_rep3 uninfected uninfected 3 crypto.wt_rep1 crypto.wt infected 1 crypto.wt_rep2 crypto.wt infected 2 crypto.wt_rep3 crypto.wt infected 3 crypto.mut_rep1 crypto.mut infected 1 crypto.mut_rep2 crypto.mut infected 2 crypto.mut_rep3 crypto.mut infected 3